Table 1. Identified genes whose mRNA AS changes upon overexpression of EndoG.
mRNA |
AS Type |
Biological role |
Reference |
AHR (Aryl-hydrocarbon receptor) |
Skipping of exon 3
|
Regulator of the development and functioning of innate and adaptive immune responses. Regulate xenobiotic-metabolizing enzymes (cytochrome P450). |
[13] |
ARIH1 (Ariadne RBR E3 ubiquitin protein ligase 1) |
Skipping of exons 1 and 2
|
Ubiquitination of target proteins. Plays a role in protein translation in response to DNA damage. |
[14] |
ARNTL (Aryl hydrocarbon receptor nuclear translocator-like) |
Skipping of exon 3
|
Activates the transcription and translation of PER1, PER2, CRY1 and CRY2 proteins. |
[15] |
BCLX (B-cell Lymphoma extra) |
Skipping of 189 nucleotides from 3’-end of exon 2 |
Regulate cell death by blocking the voltage-dependent anion channel (VDAC). Caspase activation inhibition. |
[16] |
BDKRB2 (Bradykinin receptor B2) |
Inclusion of exon 2 |
Initiation of inflammatory processes: vasodilation, edema, smooth muscle spasm. |
[17] |
CASP-2 (Caspase 2) |
Inclusion of exon 9 |
Mediation of apoptosis by proteolytic cleavage of specific protein substrates. |
[18] |
CLDN7 (Claudin 7) |
Skipping of exon 3
|
Components of the membrane system of intercellular interactions of dense connective tissues. |
[19] |
CLOCK (CLOCK circadian regulator) |
Skipping of exons 1-9
|
Regulation of circadian rhythms. |
[20] |
CRHR2 (Corticotropin releasing hormone receptor 2) |
Skipping of exon 3
|
Coordination of endocrine, autonomic, immune and behavioral responses to stress. |
[21] |
DNASE I (Deoxyribonuclease 1) |
Skipping of exon 4
|
Hydrolysis of DNA by phosphodiester bonds in the last stages of apoptosis. |
[22] |
DRG2 (Developmentally regulated GTP binding protein 2) |
Skipping of exons 1 and 2
|
Regulation of cell proliferation and differentiation. |
[23] |
FOXP3 (Forkhead box P3) |
Skipping of exon 4
|
Regulation of proliferation, differentiation and suppressor activity of regulatory T cells. |
[24] |
FLT1 (FMS-related tyrosine kinase 1) |
Skipping of exons 15-30
|
Regulation of endothelial cells angiogenesis and migration. |
[25] |
GFAP (Glial fibrillary acidic protein) |
Skipping of exons 8-9
|
Provides instructions for making a protein called glial fibrillary acidic protein. |
[26] |
GRIN 1 (Glutamate ionotropic receptor NMDA type subunit 1) |
Skipping of exon 4
|
Play a key role in the plasticity of synapses, which is believed to underlie memory and learning. |
[27] |
GTPBP8 (GTP-binding protein 8) |
Skipping of exon 2
|
GTP binding and ferrous iron transmembrane transporter activity. |
[28] |
IL18 (Interleukin 18) |
Skipping of exon 3 |
Augments natural killer cell activity in spleen cells, and stimulates interferon gamma production in T-helper type I cells. |
[29] |
KHDRBS1 (KH RNA binding domain containing, signal transduction associated 1) |
Skipping of exon 3
|
Regulation of alternative splicing, gene expression and cell cycle. |
[30] |
MGAT5 (Мannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase) |
Skipping of exons 12-18
|
The addition of beta-1,6-N-acetylglucosamine to the alpha-linked mannose on the newly synthesized glycoproteins. |
[31] |
NOVA 1 (NOVA alternative splicing regulator 1) |
Skipping of exon 4
|
Regulation of splicing and processing of mRNA in neurons. |
[32] |
NR1D2 (Nuclear receptor subfamily 1 group D member 2c) |
Skipping of exons 2-6
|
Transcriptional repressor. Regulation of circadian rhythms, carbohydrate and lipid metabolism. |
[33] |
PECAM1 |
Skipping of exon 3
|
Regulation of integrin activation, transendothelial migration of leukocytes and angiogenesis. |
[34] |
RNF128 (Ring finger protein 128, E3 ubiquitin protein ligase) |
Skipping of exon 1
|
Inhibitor of.cytokine gene transcription |
[35] |
SAMHD1 (SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1) |
Skipping of exon 14
|
Regulation of the innate and adaptive immune response along the tumor necrosis factor-alpha signaling pathway. |
[36] |
SIRT1 (Sirtuin 1) |
Skipping of exon 2
|
Deacetylation of proteins. Increasing cell sensitivity to insulin. |
[37] |
SREBF1 (Sterol regulatory element binding transcription factor 1) |
Skipping of exon 5
|
Regulation of gene expression of glucose metabolism proteins and the synthesis of fatty acids, cholesterol and lipids. |
[38] |
TERT |
Skipping of exon 7-8
|
Regulation of telomerase activity. |
[39] |
TRIM23 (Tripartite motif-containing 23) |
Skipping of exon 2 |
Autophagy activation during viral infection. |
[40] |