Table 3. The distribution of peptides from the 25% test sample of work [15] by absolute error of predicted of pI. V24 - scale variants including influence of neighboring residuals obtained in the present work.
AE |
IPC2.peptide.Conv2D |
% |
IPC2.peptide.svr.19 |
% |
IPC2_peptide |
% |
Bjellqvist |
% |
Nozaki |
% |
Thurlkill |
% |
Sillero |
% |
Dawson |
% |
V24-1 |
% |
V24-2 |
% |
V24-3 |
% |
0.05 |
11121 |
17.89 |
10431 |
17.89 |
8596 |
17.89 |
3374 |
17.89 |
3561 |
17.89 |
6241 |
17.89 |
6417 |
17.89 |
7400 |
17.89 |
5327 |
17.89 |
8800 |
29.56 |
13531 |
45.45 |
0.10 |
7654 |
16.76 |
7558 |
16.76 |
7386 |
16.76 |
3760 |
16.76 |
4121 |
16.76 |
5713 |
16.76 |
5908 |
16.76 |
6646 |
16.76 |
4991 |
16.76 |
7997 |
26.86 |
7758 |
26.06 |
0.15 |
4326 |
13.87 |
4689 |
13.87 |
5417 |
13.87 |
4332 |
13.87 |
4700 |
13.87 |
4976 |
13.87 |
5048 |
13.87 |
4724 |
13.87 |
4129 |
13.87 |
5743 |
19.29 |
3820 |
12.83 |
0.20 |
2313 |
10.58 |
2708 |
10.58 |
3486 |
10.58 |
3807 |
10.58 |
4419 |
10.58 |
3361 |
10.58 |
3076 |
10.58 |
2732 |
10.58 |
3151 |
10.58 |
3057 |
10.27 |
1552 |
5.21 |
0.25 |
1305 |
7.18 |
1408 |
7.18 |
1710 |
7.18 |
2862 |
7.18 |
3136 |
7.18 |
2301 |
7.18 |
1718 |
7.18 |
1574 |
7.18 |
2137 |
7.18 |
1269 |
4.26 |
708 |
2.38 |
0.30 |
778 |
5.53 |
803 |
5.53 |
817 |
5.53 |
2143 |
5.53 |
2138 |
5.53 |
1566 |
5.53 |
1144 |
5.53 |
988 |
5.53 |
1647 |
5.53 |
664 |
2.23 |
373 |
1.25 |
0.35 |
515 |
3.93 |
504 |
3.93 |
547 |
3.93 |
1678 |
3.93 |
1572 |
3.93 |
854 |
3.93 |
792 |
3.93 |
576 |
3.93 |
1170 |
3.93 |
325 |
1.09 |
263 |
0.88 |
0.40 |
358 |
3.12 |
255 |
3.12 |
307 |
3.12 |
1336 |
3.12 |
1336 |
3.12 |
463 |
3.12 |
551 |
3.12 |
308 |
3.12 |
930 |
3.12 |
239 |
0.80 |
219 |
0.74 |
0.45 |
261 |
2.58 |
240 |
2.58 |
243 |
2.58 |
1028 |
2.58 |
812 |
2.58 |
247 |
2.58 |
445 |
2.58 |
279 |
2.58 |
768 |
2.58 |
196 |
0.66 |
235 |
0.79 |
0.50 |
174 |
2.39 |
200 |
2.39 |
132 |
2.39 |
783 |
2.39 |
361 |
2.39 |
264 |
2.39 |
248 |
2.39 |
238 |
2.39 |
712 |
2.39 |
173 |
0.58 |
217 |
0.73 |
0.55 |
149 |
2.19 |
179 |
2.19 |
196 |
2.19 |
546 |
2.19 |
433 |
2.19 |
214 |
2.19 |
282 |
2.19 |
279 |
2.19 |
651 |
2.19 |
163 |
0.55 |
177 |
0.59 |
0.60 |
104 |
2.20 |
126 |
2.20 |
109 |
2.20 |
525 |
2.20 |
357 |
2.20 |
190 |
2.20 |
304 |
2.20 |
184 |
2.20 |
654 |
2.20 |
164 |
0.55 |
171 |
0.57 |
0.65 |
95 |
1.60 |
78 |
1.60 |
171 |
1.60 |
510 |
1.60 |
262 |
1.60 |
159 |
1.60 |
348 |
1.60 |
169 |
1.60 |
475 |
1.60 |
155 |
0.52 |
152 |
0.51 |
0.70 |
76 |
1.17 |
74 |
1.17 |
82 |
1.17 |
523 |
1.17 |
175 |
1.17 |
166 |
1.17 |
221 |
1.17 |
119 |
1.17 |
349 |
1.17 |
140 |
0.47 |
108 |
0.36 |
0.75 |
58 |
0.92 |
42 |
0.92 |
62 |
0.92 |
442 |
0.92 |
221 |
0.92 |
121 |
0.92 |
128 |
0.92 |
149 |
0.92 |
275 |
0.92 |
102 |
0.34 |
66 |
0.22 |
0.80 |
48 |
0.74 |
39 |
0.74 |
48 |
0.74 |
558 |
0.74 |
162 |
0.74 |
153 |
0.74 |
136 |
0.74 |
93 |
0.74 |
221 |
0.74 |
78 |
0.26 |
52 |
0.17 |
0.85 |
30 |
1.04 |
33 |
1.04 |
41 |
1.04 |
485 |
1.04 |
94 |
1.04 |
152 |
1.04 |
143 |
1.04 |
180 |
1.04 |
310 |
1.04 |
59 |
0.20 |
36 |
0.12 |
0.90 |
30 |
0.73 |
28 |
0.73 |
35 |
0.73 |
335 |
0.73 |
75 |
0.73 |
166 |
0.73 |
149 |
0.73 |
120 |
0.73 |
217 |
0.73 |
47 |
0.16 |
36 |
0.12 |
0.95 |
22 |
0.52 |
21 |
0.52 |
20 |
0.52 |
85 |
0.52 |
239 |
0.52 |
226 |
0.52 |
126 |
0.52 |
225 |
0.52 |
156 |
0.52 |
32 |
0.11 |
19 |
0.06 |
1.00 |
13 |
0.31 |
12 |
0.31 |
14 |
0.31 |
48 |
0.31 |
372 |
0.31 |
122 |
0.31 |
83 |
0.31 |
125 |
0.31 |
91 |
0.31 |
21 |
0.07 |
9 |
0.03 |
>1 |
344 |
4.75 |
346 |
4.75 |
355 |
4.75 |
614 |
4.75 |
1228 |
4.75 |
2119 |
4.75 |
2507 |
4.75 |
2666 |
4.75 |
1413 |
4.75 |
350 |
1.18 |
272 |
0.91 |
MAE |
0.122 |
|
0.116 |
|
0.139 |
|
0.284 |
|
0.267 |
|
0.254 |
|
0.270 |
|
0.264 |
|
0.382 |
|
0.194 |
|
0.107 |
|
R2 |
0.976 |
|
0.974 |
|
0.970 |
|
0.920 |
|
0.919 |
|
0.903 |
|
0.891 |
|
0.883 |
|
0.828 |
|
0.970 |
|
0.977 |
|
Outliers |
3055 |
10.26 |
2980 |
10.01 |
3179 |
10.68 |
11639 |
39.09 |
9837 |
33.04 |
7182 |
24.12 |
7607 |
25.55 |
6698 |
22.5 |
10039 |
33.72 |
2908 |
9.77 |
2405 |
8.08 |