BMCRM e00196 Таблица 1.

Table 1. Description of the 25 mass spectrometry experiment data sets used in this work.

ID in [7]	Unique peptides	UP	FR	PTM-1	PRIDE ID	Chemical tag	pH range
S2	13223	3022	69	6496	PXD000065	-	4.4-4.65
S3	28079	4364	72	12113	PXD000065	-	3.7-4.9
S4	26417	4799	72	10973	PXD000065	-	3.7-4.9
S5	17849	3299	72	8228	PXD000065	-	4.0-4.25
S6	17114	3427	72	8314	PXD000065	-	4.2-4.45
S7	18154	2754	72	7867	PXD000065	-	3.7-4.05
S8	23594	1456	54	9887	PXD0006291	TMT10	3.0-10.0
S9	32843	2448	72	12521	PXD0006291	TMT10	3.7-4.9
S10	28428	2073	49	12088	PXD006291	TMT10	3.0-10.0
S11	18042	1626	72	7779	PXD006291	TMT10	3.7-4.9
S12	10922	415	24	4227	PXD010006	TMT10	3.0-10.0
S13	720	86	3	238	PXD010006	TMT10	2.5-3.7
S14	38161	2935	46	17293	PXD010006	TMT10	3.0-10.0
S15	12473	367	22	5520	PXD005410	TMT10	3.0-10.0
S16	61651	3784	65	29439	PXD005410	TMT10	3.0-10.0
S17	3821	74	9	1565	PXD005410	TMT10	2.5-3.7
S18	11238	83	72*	4925	PXD000065	iTRAQ8	3.7-4.9
S19	2679	172	18	996	PXD017201	TMT10	3.0-10.0
S20	2692	157	16	897	PXD017201	TMT10	3.0-10.0
S21	2787	186	18	973	PXD017201	TMT10	3.0-10.0
S22	2847	185	19	929	PXD017201	TMT10	3.0-10.0
S23	2686	159	16	933	PXD017201	TMT10	3.0-10.0
S24	24129	1637	31	10957	PXD006291	TMT10	6.0-9.0
S25	30125	2317	42	13612	PXD006291	TMT10	6.0-11.0
[13]	26473	16419	18	7595	PXD018450	-	-

Notes. UP – the number of unmodified peptides, for which the RT conversion to virtual HI was possible; FR – number of fractions in the sample for which there was sufficient data for conversion; * – all fractions were treated as a single fraction; PTM-1 – the number of peptides with a single PTM.