Table 3. Retention coefficient values from this paper for use in the RTP program.
|
Peptide length of 10 or more residues |
Peptide length less than 10 residues |
||||||||
ПТМ |
N1 |
N2 |
M |
C2 |
C1 |
N1 |
N2 |
M |
C2 |
C1 |
[+304.21] |
3.35 |
NA |
NA |
NA |
NA |
5.5 |
NA |
NA |
NA |
NA |
K(+304.21) |
NA |
-1.3 |
-0.3 |
-1.4 |
0.05 |
NA |
1.6** |
1.35 |
1.6** |
1.85 |
K(+229.16) |
NA |
-1.65 |
-0.95 |
-1.25 |
1.55 |
NA |
1.83** |
0.35 |
1.83** |
3.3 |
[+229.16] |
3.6 |
NA |
NA |
NA |
NA |
4.6 |
NA |
NA |
NA |
NA |
S(+79.97) |
1.4* |
1.95 |
-0.05 |
2* |
1.7* |
1.3* |
1.6* |
2.7 |
1.9* |
1.61* |
T(+79.97) |
2.37** |
3.9* |
1.05 |
2.2* |
2.37** |
2.37** |
1.6* |
3.1* |
2.37** |
2.37** |
Y(+79.97) |
4.65** |
4.6* |
4.3* |
6.2* |
4.65** |
4.65** |
4.8* |
4.1* |
3.9* |
4.65** |
C(+71.04) |
3.37** |
3.37** |
2.25 |
4.5* |
3.37** |
3.37** |
3.37** |
3.37** |
3.37** |
3.37** |
C(+57.02) |
0.75 |
1 |
0 |
0.05 |
3.1* |
2.15 |
2.65 |
1.7 |
1.3 |
3.6* |
D(+57.02) |
1.95 |
0.45 |
-2.25 |
-0.2 |
0.71** |
3.6 |
0.71** |
0.71** |
0.71** |
0.71** |
E(+57.02) |
0.5 |
0.45 |
-2.4 |
0.65 |
0.41** |
2.85 |
0.41** |
0.41** |
0.41** |
0.41** |
[+42.01] |
8.55 |
NA |
NA |
NA |
NA |
7.85 |
NA |
NA |
NA |
NA |
K(+42.01) |
NA |
2.8** |
3 |
2.00* |
3.4* |
NA |
2.8** |
2.8** |
2.8** |
2.8** |
M(+31.99) |
0.9* |
0.45 |
0.65 |
1 |
1.01** |
1.01** |
1.01** |
2.05 |
1.01** |
1.01** |
P(+31.99) |
0.3** |
0.3** |
0.3 |
0.3** |
0.3** |
0.3** |
0.3** |
0.3** |
0.3** |
0.3** |
[+27.99] |
7.45 |
NA |
NA |
NA |
NA |
6.85 |
NA |
NA |
NA |
NA |
K(+27.99) |
0.8 |
1.85 |
1.55 |
0.75 |
2.05 |
2.1 |
1.8 |
4.4 |
2.55 |
3.25 |
M(+15.99) |
-0.2* |
-0.65 |
-1.4 |
-1.25 |
3.3* |
1.15 |
0.75 |
0.8 |
0.35 |
3.1* |
P(+15.99) |
1.4** |
1.4** |
1.40 |
1.4** |
1.4** |
1.4** |
1.4** |
1.4** |
1.4** |
1.4** |
[+14.02] |
3.7 |
NA |
NA |
NA |
NA |
3.7** |
NA |
NA |
NA |
NA |
K(+14.02) |
NA |
-0.3* |
0.1 |
0.55** |
1.85 |
NA |
0.55** |
0.55** |
0.55** |
0.55** |
K(-.98) |
NA |
NA |
NA |
NA |
-2.4 |
NA |
NA |
NA |
NA |
-2.4** |
R(-.98) |
NA |
NA |
NA |
NA |
-0.8 |
NA |
NA |
NA |
NA |
-0.8** |
Notes. * – the value calculated from a set of peptides with more than one PTM; ** – insufficient data for calculation, the value is taken as an average of those already calculated for this PTM at other sites; NA – not applicable for modification at this position.