Алгоритмы расчёта параметров электрохимического биосенсора

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В.В. Шумянцева
В.В. Пронина

Аннотация

Цель работы – представить экспериментальные результаты в виде алгоритма анализа модификации печатного графитового электрода, включая возможность его регенерации для необратимо окисляющихся биологически активных соединений. Разработан протокол количественного анализа и исследования механизма взаимодействия лекарственный препарат-ДНК методом дифференциально- импульсной вольтамперометрии, включающий следующие параметры: константу связывания комплекса, свободную энергия Гиббса и электрохимический коэффициент токсичности препарата.

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Как цитировать
Шумянцева V., & Пронина V. (2022). Алгоритмы расчёта параметров электрохимического биосенсора. Biomedical Chemistry: Research and Methods, 5(3), e00178. https://doi.org/10.18097/BMCRM00178
Раздел
ПРОТОКОЛЫ ЭКСПЕРИМЕНТОВ, ПОЛЕЗНЫЕ МОДЕЛИ, ПРОГРАММЫ И СЕРВИСЫ

Библиографические ссылки

  1. Mostafa M.I., Tian Y., Anjum S., Hanif S., Hosseini M., Lou B., Xu G. (2022) Comprehensive review on the electrochemical biosensors of different breast cancer biomarkers. Sensors and Actuators B: Chemical, 365, 131944. DOI
  2. Pepe M.S., Etzioni R., Feng Z., Potter J. D., Thompson M.L., Thornquist M., Winget M., Yasui Y. (2001) Phases of Biomarker Development for Early Detection of Cancer. JNCI: Journal of the National Cancer Institute, 93, 14, 1054–1061. DOI
  3. 3. Lu D., Xu Q., G. Pang G. (2019) A bombykol electrochemical receptor sensor and its kinetics. Bioelectrochemistry, 128, 263-273, 1567-5394. DOI
  4. Ronkainen N.J., Halsall H.B., Heineman W.R. (2010) Electrochemical biosensors. Chem. Soc. Rev., 39, 1747–1763. DOI
  5. Ghosh M., Mandal S., Roy A., Mondal P., Mukhopadhyay S. K., Chakrabarty S., Chakrabarti G., Pradhan S.K. (2021) Synthesis and characterization of a novel nanocarrier for biocompatible targeting of an antibacterial therapeutic agent with enhanced activity. Journal of Drug Delivery Science and Technology, 66, 102821. DOI
  6. Randles J.E.B. (1948) A cathode-ray polarograph. Part II - The current-voltage curves. Trans Faraday Soc., 44, 327.
  7. Sevcik A. (1948) Oscillographic polarography with periodical triangular voltage. Collect Czech ChemCommun, 13, 349.
  8. Mohammadi A., Moghaddam A.B., Alikhani E., Eilkhanizadeh K., Mozaffari S. (2013) Electrochemical quantification of fluoxetine in pharmaceutical formulation using carbon nanoparticles. Micro & Nano Letters, 8, 853-857. DOI
  9. Ferapontova E.E. (2018) DNA Electrochemistry and Electrochemical Sensors for Nucleic Acids. Annual review of analytical chemistry, 11 (1), 197–218. DOI
  10. Kuzikov, A.V., Bulko, T.V., Koroleva, P.I., Masamrekh, R.A., Babkina, S.S., Gilep, A.A., Shumyantseva, V.V. (2020) Cytochrome P450 3A4 as enzyme for drug biotransformation: the role of sensor systems modifications in electrocatalysis and electroanalysis. Biomeditsinskaya Khimiya, 66 (1), 64-70. DOI
  11. Shumyantseva, V.V., Sigolaeva, L.V., Agafonova, L.E., Bulko, T.V., Pergushov, D.V., Schacher, F.H., Archakov, A.I. (2015) Facilitated biosensing via direct electron transfer of myoglobin integrated into diblock copolymer/multi-walled carbon nanotube nanocomposites. J. Mater. Chem. B, 3(27) 5467–5477. DOI
  12. Shumkov, A.A., Suprun, E.V., Shatinina, S.Z., Lisitsa, A.V., Shumyantseva, V.V., Archakov, A.I. (2013) Gold and Silver Nanoparticles for Electrochemical Detection of Cardiac Troponin I based on Striping Voltammetry. BioNanoScience, 2 (3), 216-222. DOI
  13. Nimal R., Unal D.N., Erkmen C., Bozal-Palabiyik B., Siddiq M., Eren G., Shah A., Uslu B. (2022) Development of the electrochemical, spectroscopic and molecular docking approaches toward the investigation of interaction between DNA and anti-leukemic drug azacytidine. Bioelectrochemistry, 146, 108135,1567-5394. DOI
  14. Topkaya S.N., Kaya H.O., Cetin A.E. (2021) Electrochemical detection of linagliptin and itsinteraction with dna. Turkish J. Pharm. Sci., 18, 645–651. 24 DOI
  15. Manzano, M., Viezzi, S., Mazerat, S., Marks, R.S., Vidic, J. (2018) Rapid and label-free electrochemical DNA biosensor for detecting hepatitis A virus. Biosens. Bioelectron, 100, 89–95. DOI
  16. Lavín, Á., Vicente, J.D., Holgado, M., Laguna, M.F., Casquel, R., Santamaria, B., Maigler, M.V., Hernandez, A.L., Ramirez, Y. (2018) On the Determination of Uncertainty and Limit of Detection in Label-Free Biosensors. Sensors, 18, 2038. DOI
  17. Armbruster, D.A., Pry, T. (2008) Limit of blank, limit of detection and limit of quantitation. Clin.Biochem. Rev., 29, S49–S52.
  18. Bolat, G. (2020) Investigation of poly(CTAB-MWCNTs) composite based electrochemical DNA biosensor and interaction study with anticancer drug Irinotecan. Microchemical Journal, 159, 105426. DOI
  19. Hasanzadeh, M., Shadjou, N. (2016) Pharmacogenomic Study Using Bio- and Nanobioelectrochemistry: Drug–DNA Interaction. Mater. Sci. Eng. C, 61, 1002–1017. DOI
  20. Acharya, M., Bernard, A., Gonzalez, M., Jiao, J., De Vries, R., Tran, N. (2012) Open-label, phase I, pharmacokinetic studies of abiraterone acetate in healthy men. Chemother.Pharmacol., 69, 1583−1590. DOI
  21. Gurova, K. (2009) New hopes from old drugs: revisiting DNA-binding small molecules as anticancer agents. Futur. Oncol.,5, 1685 DOI
  22. Muti, M. (2018) Electrochemical monitoring of the interaction between anticancer drug and DNA in the presence of antioxidant. Talanta., 178, 1033–1039. DOI
  23. Bagni, G., Osella, D., Sturchio, E., Mascini, M. (2006) Deoxyribonucleic acid (DNA) biosensors for environmental risk assessment and drug studies. Anal.Chim.Acta.,81–89, 573-574. DOI
  24. Shumyantseva, V.V., Bulko, T.V., Tikhonova, E.G., Sanzhakov, M.A., Kuzikov, A.V., Masamrekh, R.A., Pergushov, D.V., Schacher, F.H., Sigolaeva, L.V. (2021) Electrochemical studies of the interaction of rifampicin and nanosome/rifampicin with dsDNA. Bioelectrochemistry, 140, 107736. DOI
  25. Wani, T.A., Alsaif, N., Bakheit, A.H., Zargar, S., Al-Mehizia, A.A., Khan, A.A. (2020) Interaction of an abiraterone with calf thymus DNA: Investigation with spectroscopic technique and modelling studies. Bioorg Chem., 100, 103957. DOI
  26. Nafisi, S., Saboury, A.A., Keramat, N., Neault, J.F., Tajmir-Riahi, H.A. (2007) Stability and structural features of DNA intercalation with ethidium bromide, acridine orange and methylene blue. J. Mol. Struct.,827, 35–43. DOI
  27. Sirajuddin, M., Ali, S., Badshah, A. (2013) Drug–DNA interactions and their study by UV–vis, fluorescence spectroscopies and cyclic voltammetry. J. Photochem. Photobiol. B: Biol.,124, 1–19. DOI
  28. DeDogan-Topal, B., Bozal-Palabiyik, B., Ozkan, S.A., Uslu, B. (2014) Investigation of anticancer drug lapatinib and its interaction with dsDNA by electrochemical and spectroscopic techniques. Sens. Actuators B Chem.,194 185–194. DOI
  29. Temerk, Y., Ibrahim, M., Ibrahim, H., Kotb, M. (2016) Interactions of an anticancer drug lomustine with single and double stranded DNA at physiological conditions analysed by electrochemical and spectroscopic methods. J. Electroanal. Chem.,769, 62–71. DOI
  30. Yazan, Z., Bayraktepe, D.E., Dinç, E. (2020) Four-way parallel factor analysis of voltammetric four-way dataset for monitoring the etoposide-DNA interaction with its binding constant determination.Bioelectrochemistry, 134, 107525. DOI
  31. Chaires, J.B. (2006) A thermodynamic signature for drug-DNA binding mode., Arch. Biochem.Biophys., 453, 26–31. DOI